Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNH-------HYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVH----RLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN |
| 4C9H Chain:A ((23-301)) | -----------------------------------FLIDFLMGGVSAAVAKTAASPIERVKLLIQNQDEMLKQGTLDRKYAGILDCFKRTATQEGVISFWRGNTANVIRYFPTQALNFAFKDKIKAMFGFK-KEEGYAKWFAGNLASGGAAGALSLLFVYSLDYARTRLAADS--ARQFNGLIDVYKKTL-KSDGVAGLYRGFLPSVVGIVVYRGLYFGMYDSLK---------------------L-----ASFLLGWVVTTGASTCSYPLDTVRRRMMMTS--GQAVKYDGAFDCLRKIVAAEGV-GSLFKGCGANILRGVAGAGVISMYDQLQMILFGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109210 for 1826 contacts (-59.8/contact) +
2D Compatibility (PS) -25281 + (NN) 6148 + (LL) 3288
1D Compatibility (HY) -18000 + (ID) 3950
Total energy: -147005.0 ( -80.51 by residue)
QMean score : 0.091
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