Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPSRLQLGLRAAYSGISSVAGFSIFLVWTVVYRQPGTAAMGGLAGVLALWVLVTHVMYMQDYWRTWLKGLRGFFFVGVLFSAVSIAAFCTFLVLAITRHQSLTDPTSYYLSSVWSFISFKWAFLLSLYAHRYRADFADISILSDF |
| 1V54 Chain:I ((29-38)) | --------------------VSLGFATFYKFAVAEKRKKAYADFYRNYDSMKDFEEMRKAGIFQSAK------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -431 for 30 contacts (-14.4/contact) +
2D Compatibility (PS) -883 + (NN) 872 + (LL) 8456
1D Compatibility (HY) -800 + (ID) 150
Total energy: 7064.0 ( 235.47 by residue)
QMean score : -0.358
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