Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGAGPKRRALAAPAAEEKEEAREKMLAAKSADGSAPAGEGEGVTLQRNITLLNGVAIIVGTIIGSGIFVTPTGVLKEAGSPGLALVVWAACGVFSIVGAL----CYAELGTTISKSGGDYAYMLEVYGSLPAF---LKLWIELLIIRPSSQYIVALVFATYLLKPLFPTCPVPEEAAKLVACLCVL-LLTAVNCYSVKAATRVQDAFAAAKLLALALIILLGFVQIG----KGDVSNLDPNFSFEGTKLDVGNIVLALYSGLFAYGGWNYLNFVTEEMINPYRNLPLAIIISLPIVTLVYVLTNLAYFTTLSTEQMLSSEAVAVDFGNYHLGVMSWIIPVFVGLS-CFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFTCVMTLLYAFSKDIFSVINFFSFFNWLCVALAIIGMIWLRHRKPELERPIKVNLALPVFFILACLFLIAVSFWKTPVECGIGFTIILSGLPVYFFGVWWKNKPKWLLQGIFSTTVLCQKLMQVVPQET |
| 3OB6 Chain:A ((18-341)) | ---------------------------------------------------------MVSGNIMGSGVFLLPANL---ASTGGIAIYGW----LVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWI-----GAIAMVVIGVGYLSYFFPILKDPL--VLTITCVVVLWIFVLLNIVGPKMITRVQ-----AVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGT---FGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVN-KAGTPVAGLIIVGILMTIFQLSSISPGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OB6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307521 for 2730 contacts (-112.6/contact) +
2D Compatibility (PS) -31723 + (NN) -10676 + (LL) 7224
1D Compatibility (HY) -22800 + (ID) 4350
Total energy: -369846.0 ( -135.47 by residue)
QMean score : 0.358
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