Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTTVDDVLEHGGEFHFFQKQMFFLLALLSATFAPIYVGIVFLGFTPDHRCRSPGVAELSLRCGWSPAEELNYTVPGPGPAGEASPRQCRRYEVDWNQSTFDCVDPLASLDTNRSRLPLGPCRDGWVYETPGSSIVTEFNLVCANSWMLDLFQSSVNVGFFIGSMSIGYIADRFGRKLCLLTTVLINAAAGV--------LMAISPTYT----------WMLIFRLIQGLVSKAGWLIGYILITEFVGRRYRRTVGIFYQVAYTVGLLVLAGVAYALPH-----------WRWLQFTVSLPNFFFLLYYWCIPESPRWLISQNKNAEAMRIIKHIAKKNGKSLPA-SLQRLRLEEETGKKLNPSFLDLVRTPQIRKHTMILMYNWFT--SSVLYQG--LIMHMGLAGDNIYLDFFYSALVEFPAAFMIILTIDRIGRR--YPWAASNMVAGAACLASVF---IPGDLQWLKIIISCLGRMGITMAYEIVCLV-NAELYPTFIRNLGVHICSSMCDIGGIITPFLVYRL-TNIWL-ELPLMVFGVLGLVAGGLVL-LLPETKGKALPETIEEAENMQRPRKNKEKMIYLQVQKLDIPLN |
| 4JA4 Chain:A ((52-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------AANS-LLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGILRKIM---GNTLATQAVQEIKHSLDHG---------MFGVGVIVIGVMLSIFQQFVGINVVLYYAPEV-----------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV---AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSW-NGFSYWIYGCMGVLAALFMWKFVPETKGK----TLEELEALWE--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260801 for 2673 contacts (-97.6/contact) +
2D Compatibility (PS) -36586 + (NN) -7517 + (LL) 10512
1D Compatibility (HY) -37200 + (ID) 4850
Total energy: -336442.0 ( -125.87 by residue)
QMean score : 0.213
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