Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGFEELLEQVGGFGPFQLRNVALLALPRVLLPLHFLLPIFLAAVPAHRCALPGAPANFSHQDVWLEAHLPREPDGTLSSCLRFAYPQALPNTTLGEERQSRGELEDEPATVPCSQGWEYDHSEFSSTIATESQWDLVCEQKGLNRAASTFFFAGVLVGAVAFGYLSDRFGRRRLLLVAYVSTLVLGLASA------ASVS-----------YV-MFAITRTLTGSALAGFTIIVMPLELEWLDVEHRTVAGVLSSTF-WTGGVMLLALVGYLI-----------RDWRWLLLAVTLPCAPGILSLWWVPESARWLLTQGHVKEAHRYLLHCARLNGRPVCEDSFSQEAVSKVAA-------GERVVRRPSYLDLFRTPRLRHISLCCVVVWFGVNFSYYGLSLDVSGLGLNVYQTQLLFGAVELPSKLLVYLSVRYAGRRLTQAGTLLGTALAFGTRLLVSSDMKSWSTVLAVMGKAFSEAAFTTA-----YLFTSELYPTVLRQTGMGLTALVGRLGGSLAPLAALLDGVWLSLPKLTYGGIALLAAGTALLLPETRQAQLPETIQDVERKSAPTSLQEEEMPMKQVQN |
| 4JA4 Chain:A ((67-410)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGV-GLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM----QEQAEGIL--------RKIMGNTLATQAVQEIKHSLDHGMFGVGVIVIGVMLSIFQ----QFVGINVVLYYAPEV-----------LL-----QT-IIVGVINLTFTVLAIMTVDKFGRKPLQIIGALG--MAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JA4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -164338 for 1903 contacts (-86.4/contact) +
2D Compatibility (PS) -28571 + (NN) -5873 + (LL) 12796
1D Compatibility (HY) -27600 + (ID) 3950
Total energy: -217536.0 ( -114.31 by residue)
QMean score : 0.148
|
|
|