Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIPDNDPGTLSQDALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGWVYDQSSFPSTIVTKWDLVCESQPLNSVAKFLFMAGMMVGGNLYGHLSDRFGRKFVLRWSYLQLAIVGTCAA---------------------FAPTILVYCSLRFLAGAATFSIIVNTVLLIVEWITHQFCAMALTLTLCAASIGHITLGSLAFVIR------------------DQCILQLVMSAPCFVFFLFSRWLAESARWLIINNKPEEGLKELRKAAHRNGMKNAEDILTMEVLKSTMKQELEAAQKKHSLCELLRIPNICKRICFLSFVRFAS-TIPFWGLTLHLQHLG--NNVFLLQTLF-GAVTLLANCVAPWALNHMSRRLSQMLLMFLLATCL--LAIIFVPQE--MQTLRVVLATLGVGAASLGITCSTAQENELIPSIIRGRATGITGN---FANIGGALASLMM-----ILSIYSRPLPWIIYGVFAILSGLVVL-LLPETRNQPL--LDSIQDVENEGVNSLAAPQRSSVL |
| 4GC0 Chain:A ((67-479)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------GCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECI-------PALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKI-----MGNT---LATQAVQE-IKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLL-SEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -261828 for 2987 contacts (-87.7/contact) +
2D Compatibility (PS) -36528 + (NN) -15000 + (LL) 13060
1D Compatibility (HY) -33600 + (ID) 4400
Total energy: -338296.0 ( -113.26 by residue)
QMean score : 0.261
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