Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEARVLRAAGGFGRARRLLASASWVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPALRALRGPALLDAAIPRLGPTRAPAEALGVLSPSYLAPLTRAPRPSSWASCSGAAAGPTWNLVCGDGWKVPLEQVSHLLGWLLGCVILGAGCDRFGRR-AVFVASLVLTTG---LGASEALAASFPTLLVLRLLHGGTLAGALLALYLARLELCDPPHRLAFSMGAGLFSVVGTL---LLPGLAALVQDWRLLQGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILWRFAEASGVGPGDSSLEENSLATATELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFY-LPYFLEAGL-EAAAL--------------VFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQYLPG-----WTVLF-LSVLGLLASRAVSALSSLFAAEVFPTVIRGAGLG---LVLGAGFLGQAA-GPL--DTLHGRQGFFLQQVVFASLAVLALLCVL-LLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH |
| 4LDS Chain:A ((50-427)) | --------------------------------------------------------------------------------------------------------------------------------------SMLIGAIVGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLALLIIGRLIIGLAVGGSMST--VPVYLS--EMAPTEYRGSLGSLNQLMITIGILAAYLVNYAFADIEGWRWMLGLAVVPSVILLVGIYF---MPESPRWLLENRNEEAARQVM-------KITYDDSEIDKE-LKEMKEINAIS-ESTWTVIKSP---------WLGRI------LIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKK-LLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALSTEWVF----LIFAFIGVLAMIFVIKFLPETRG---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -242069 for 2572 contacts (-94.1/contact) +
2D Compatibility (PS) -35959 + (NN) -26233 + (LL) 12796
1D Compatibility (HY) -35200 + (ID) 5500
Total energy: -332165.0 ( -129.15 by residue)
QMean score : 0.236
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