Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPVEEFVAGWISGALGLVLGHPFDTVKVRLQTQ----------TTYRGIVDCMVKIYRHESLLGFFKGMSFPIASIAVVNSVLFGVYSNTLLVLTATSHQERRAQPPSYMHIFLAGCTGGFLQAYCLAPFDLIKVRLQNQTEPRAQPGSPPPRYQGPVHCAASIFREEGPRGLFRGAWALTLRDTPTVGIYFITYEGLCRQYTPEGQNPSSATVLVAGGFAG--IASWVAAT-------PLDMIKSRMQMDGLRRRVYQGMLDCMVSSIRQEGLGVFFRGVTINSARAFPVNAVTFLSYEYLLRWWG |
| 4C9Q Chain:A ((30-299)) | ----NFLMGGVSAAIAKTAASPIERVKILIQNQDEMIKQGTLDKKYSGIVDCFKRTAKQEGLISFWRGNTANVIRYFPTQALNFAFKDKIKLMF---GFKKE-GYGKWFAGNLASGGAAGALSLLFVYSLDFARTRLAADAKS-----AR--QFNGLTDVYKKTLKSDGIAGLYRGFMPSVVGIVVYRGLYFGMFDSL---------KPL---------FLASFLLGWVVTTGASTCSYPLDTVRRRMMMTSGQAVKYNGAIDCLKKIVASEGVGSLFKGCGANILRSVAGAGVISMYDQLQMILFG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C9Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90306 for 1703 contacts (-53.0/contact) +
2D Compatibility (PS) -24114 + (NN) 1572 + (LL) 1344
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: -126454.0 ( -74.25 by residue)
QMean score : 0.088
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