Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKILFVEPAIFLSAFAMTLTGPLTTQYVYRRIWEETGNYTFSSDSNISECEKNKSSPIFAFQEEVQKKVSRFNLQMDISGLIPGLVSTFILLSI-SDHYGRKFPMILSSVGALATSVWLCLLCYFAFPFQLLIASTFIGAFCGNYTTFWGACFAYIVDQCKEHKQKTIRIAIIDFLLGLVTGLTGLSSGYFIRELGFEWSFLIIAVSLAVNLIYILFFLGDPVKECSSQNVTMSCS-EGFKNLFYRTYMLFKNASGKRRFLLCLLLFTVITYFFVVIGIAPIFILYELDSPLCWNEVFIGYGSALGSASFLTSFLGIWLFSYCMEDIHMAFIGIFTTMTGMAMTAFASTTLMMFLA----RVPFLFTIVPFS--VLRSMLSKVVRSTEQGTLFACIAFLETLGGVTAVSTFNGIYSATVAWYPGFTFLLSAGLLLL-PAISLCVVKCTSWNEGSYELLIQEESSEDASDR |
| 1GVH Chain:A ((1-396)) | MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKE----IFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPG-------------------------QEVLDAWGKAYGVLANVFINREAEIYNENAS-------------KAGGWEGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKG-------------YRIAVKREEGGQVSNWLHNHA-----------NVGDVVKLVAPAGDFFMAVADDTP------VTLISAGVGQTPMLAMLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAKGQFDSEG--LMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECFGPHKVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -315181 for 3080 contacts (-102.3/contact) +
2D Compatibility (PS) -39962 + (NN) 3390 + (LL) 6324
1D Compatibility (HY) 10000 + (ID) 2300
Total energy: -337729.0 ( -109.65 by residue)
QMean score : 0.186
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