Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIEDSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK |
3HP4 Chain:A ((2-178)) | ---------------------------------------------DNTILILGD-LSAAYGL----------QQEEGWVKLLQDKYDAEQS--DIVLINASISGETSGGALRRLDALLEQYEPTHVLIELGANDGLR------GFPVKKMQTNLTALVKKSQAA--NAMTALMEIYIPPNY----G---PRYSKMFTSSFTQISEDTNAHLMNFFMLD---I-AGKSDLMQNDSLHPNKKAQPLIRDEMYDSI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HP4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80751 for 1436 contacts (-56.2/contact) +
2D Compatibility (PS) -19748 + (NN) -12791 + (LL) 5436
1D Compatibility (HY) -5200 + (ID) 1850
Total energy: -114904.0 ( -80.02 by residue)
QMean score : 0.250
|
|
|