Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLPDIVNMYFDADSCNDTDALSETFAPDAVVEDE-----GARHQGVVAILRWWVAAKKAAS-YVAEPLESTVDGDKALVRAKVSGRFPGSPVTLTY--SFTIKDGRIARLEIQ
3FH1 Chain:A ((21-124))
----EIMRRFNDVFQLHDPAALPELIAEECVIENTVPAPDGARHAGRQACVQLWSA-IATQPGTRFDLEETFVAGDRATIRWRYWM---ADGNSVRGVNLMRVQDGRIVEAM--
General information:
TITO was launched using:
RESULT:
Template:
3FH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32149 for 632 contacts (-50.9/contact) +
2D Compatibility (PS) -10218 + (NN) -4465 + (LL) 728
1D Compatibility (HY) -2800 + (ID) 1350
Total energy: -50254.0 ( -79.52 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3FH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FH1-query.scw
PDB file :
Tito_Scwrl_3FH1.pdb
: