Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYKKLLDELKKEIGPI---AKIFLNKAME---SLGYDDVDDSNYKE-ILSVLKMN--------KELREYVEIVEERLEKEG
1YJG Chain:A ((120-187))
--------DDLKGKITTVKNASTSFLTKAKSKTADLGKDDVKDADAKTAID---IADTGAKDKGAEELIKLNTAIDALL----
General information:
TITO was launched using:
RESULT:
Template:
1YJG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3308 for 242 contacts (-13.7/contact) +
2D Compatibility (PS) -5767 + (NN) -3383 + (LL) 1476
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -13532.0 ( -55.92 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1YJG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YJG-query.scw
PDB file :
Tito_Scwrl_1YJG.pdb
: