Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKSNGEEPKMGGRMERFQQGVRKRTLLAKKKVQNITKEDVKSYLFRNAFVLLTVTAVIVGTILGFTLRPYRMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVTGMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENMHREGKIVRVTAADAFLDLIRNMFPPNLVEACFKQFKTNYEKRSFKVPIQANETLVGAVINNVSEAMETLTRITEELVPV-P-GSVNGVNALGLVVFSMCFGFVIGNM--------KEQGQALREFFDSLNEAIMRLVAVIMWYAPVGILFLIAGKIVEMEDMGV-IGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRK---NPWVFIGGLLQALITALGTSSSSATLPITFKCLEENNGVDKRVTRFVLPVGATINMDGTALYEALAAIFIAQVNNFELNFGQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDD------ITLIIAVDWFLDRLRTTTNVLGDSLGAGIVEHLSRHELKNRDVEMGNSVIEENEMKKPYQLIAQDNETEKPIDSETKM |
| 3KBC Chain:B ((20-412)) | ---------------------------------------------------------LILGAIVGLILGHYGYAHAVHTYVKPFGDLFVRLLCMLVMPIVFASLVVGAASISPARLGRVGVKIVVYYLLTSAFAVTLGIIMARLFNP--GAGIHLAVGGQ----------------------------QFQ----------PHQA----------------PPLVHILLDIVPTNPFGALANGQVLPTIFFAIILGIAITYLMNSENEKVRKSAETLLDAINGLAEAMYKIVNGVMQYAPIGVFALIA---YVMAEQGVHVVGELAKVTAAVYVGLTLQILLV----YFVLLKIYGIDPISFIKHAKDAMLTAFVTRSSSGTLPVTMRVAKEM-GISEGIYSFTLPLGATINMDGTALYQGVATFFIANALGSHLTVGQQLTIVLTAVLASIGTAGVPGAGAIMLCMVLHSVGLPLTDPNVAAAYAMILGIDAILDMGRTMVNVTGDLTGTAIVAKTE-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368949 for 3299 contacts (-111.8/contact) +
2D Compatibility (PS) -38085 + (NN) -5286 + (LL) 12032
1D Compatibility (HY) -42000 + (ID) 7450
Total energy: -449738.0 ( -136.33 by residue)
QMean score : 0.299
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