Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSWLTVLGAGMVVLHFLQKLLFPYFWDDFWFVLKVVLIIIRLKKYEKRGELVTVLDKFLSHAKRQPRKPFIIYE--GDIYTYQDVDKRSSRVAHVFLNHSSLKKGDTVALLMSNEPDFVHVWFGLAKLGCVVAFLNTNIRSNSLLNCIRACGPRALVVGADLL--GTVEEILPSLSENISVW-GMKDSVPQGVISLKEKLSTS-PDEPVPRSHHVVSLLKSTCLYIFTSGTTGLPKAAVISQLQ-VLRGSAVLWAFGC--TAHDIVYITLPLYHSSAAILGISGCVELGATCVLKKKFSASQFWSDCKKYDVTVFQYIGELCRYLCKQSKR--EGEKDHKVRLAI--GNGIRSDVWREFLDRFGNIKVCELYAATESSISFMNYTGRIGAIGRTNLFYKLLSTFDLIKYDFQKDEPMRNEQGWCIHVKKGEPGLL-ISRVNAKNPFFGYAGPYKHTKDKLLCDVFKKGDVYLNTGDLIVQDQDNFLYFWDRTGDTFRWKGENVATTEVADVIGM-LDFIQEANVYGVAISGYEGRAGMASIILKPNTSLDLEKVYEQVV-TFLPAYACPRFLRIQEKMEATGTFKLLKHQLVEDGFNPLKISEPLYFMDNLKKSYVLLTRELYDQIMLGEIKL |
1T5H Chain:X ((2-503)) | -----------------------------------------------------QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHAD-GLRPQQRVAVVAPNSADVVIAILALHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAV--QVADAIFQSGS----GARIIFLGDL------------VRDGEPYSYGPPIEDPQREPAQPAFIFYTS---GLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQHLPG-EKVNIYGTTEAMNSLYMRQPKTGTEMAP------GFFSEVRIVRIGG--------GVDEIVANGEEG-ELIVAASD-SAFVGYLNQPQATAEKL-------QDGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAP-GVTEVVVIGLADQR-WGQSVTACVVPRLGETLSADALDTFCRSSELADFKRPKRYFILDQLPKNALNKVLRRQLVQQVS------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1T5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -334872 for 4018 contacts (-83.3/contact) +
2D Compatibility (PS) -51279 + (NN) -11343 + (LL) 11856
1D Compatibility (HY) -13600 + (ID) 5150
Total energy: -404388.0 ( -100.64 by residue)
QMean score : 0.411
|
|
|