Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQ--PDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIE---------DSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK |
3MIL Chain:A ((3-208)) | ---------------------------------------------YEKFLLFGDSITEFAFNTRPIE---DGKDQYALGAALVNEYTR-----KMDILQRGFKGYTSRWALKILP-EILKHESNIVMATIFLGANDACSA--GPQSVPLPEFIDNIRQMVSLMKSY--HIRPIIIGPGLVDREKWEKEKSEEIALGYFRTNENFAIYSDALAKLANEEKVPFVALNKAFQQEGGD-AWQQLLTDGLHFSGKGYKIFHDELLKVIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MIL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84259 for 1615 contacts (-52.2/contact) +
2D Compatibility (PS) -21791 + (NN) -7451 + (LL) 4616
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -115135.0 ( -71.29 by residue)
QMean score : 0.366
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