Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRALSLLLALCLCLSLMPAASASVVESTVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
M052 Chain:A ((29-213))
----------------------------STVQVGPYTFEIWFDGTATLTRYDESLAGSTYADIPASVTDENGQEYPVTVIGEKAFEETNITGVTVPDSVISIGRLAFAYCNSLSDVKLSENLIYINELAFASCDALKEITIPASVEKMDNPFRWSNALDTVYMEGMVAPE
General information:
TITO was launched using:
RESULT:
Template:
M052.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114507 for 1120 contacts (-102.2/contact) +
2D Compatibility (PS) -14728 + (NN) -2404 + (LL) 3120
1D Compatibility (HY) -20400 + (ID) 7100
Total energy: -156019.0 ( -139.30 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_M052.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M052-query.scw
PDB file :
Tito_Scwrl_M052.pdb
: