Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLE-----------NDSGCKGV---CGKVPNTDVTSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
1O98 Chain:A ((314-499)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DNTIGEVLSQHGLRQLRIAETEKYPHVTFFMSGGREEEFPGEDRILI---NSPKVPTYDLKPEMSAYEVTDALLKEIEAD-KYDAIILNYANPDM----------VG---------------HSGKLEPTIKAVEAVDECLGKVVDAILAKG---GIAIITADHGNADEVLTP--DGKPQT--AHTTNPVPVIVTK-KGI----KL----------RDGGILGDLAPTMLDLLGLPQ------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1O98.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61624 for 1196 contacts (-51.5/contact) +
2D Compatibility (PS) -18585 + (NN) -6260 + (LL) 29308
1D Compatibility (HY) -4000 + (ID) 1150
Total energy: -62311.0 ( -52.10 by residue)
QMean score : 0.117
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