Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
| M052 Chain:A ((24-421)) | -----------------------LVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQ---------IHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITS--------------------------------NKCQKLVREAVKNLEGPPSRN---------------------------------SKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPT-----------ERSMKAILSFAKSHRFDVEFVDEGST--------KKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
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General information:
TITO was launched using:
| RESULT:
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Template: M052.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22991 for 2326 contacts (-9.9/contact) +
2D Compatibility (PS) -33672 + (NN) -21300 + (LL) 9864
1D Compatibility (HY) -38400 + (ID) 15150
Total energy: -121649.0 ( -52.30 by residue)
QMean score : 0.304
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