Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPEA-GWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
1M0U Chain:A ((48-248))
--HSYTLFYFNVKALAEPLRYLFAYGNQEYEDVRVTRDEWPALKPT---MPMGQMPVLEVDGKRVHQSISMARFLAKTVGLC-GATPWEDLQIDIVVDTI-NDFRLKIAVVSYEPEDEIKEKK--LVTLNAEVIPFYLEKLEQTVKDNDGHLALGKLTWADVYFAGITDYMNYMVK----RDLLEPYPALRGVVDAVNALEPIKAWIEKRPVTE---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1M0U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123721 for 1522 contacts (-81.3/contact) +
2D Compatibility (PS) -22143 + (NN) -14298 + (LL) 3116
1D Compatibility (HY) -12400 + (ID) 2350
Total energy: -171796.0 ( -112.88 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_1M0U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M0U-query.scw
PDB file :
Tito_Scwrl_1M0U.pdb
: