Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKNSLYIISSLFFACVLFVYATATNFQNSTSARQVKTETYTNTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTKPVAPSSSTSNSSTSSSSETSSSTKATSSKTN
M053 Chain:A ((36-228))
-----------------------------------VKTETYTNTVTNVPIDIRYNSDKYFISGFASEVSVVLTGANRLSLASEMQESTRKFKVTADLTDAGVGTIEVPLSIEDLPNGLTAVATPQKITVKIGKKAQKDKVKIVPEIDPSQIDSRVQIENVMVSDKEVSITSDQETLDRIDKIIAVLPTSERITGNYSGSVPLQAIDRNGVVLPAVITPFDTIMKVTTK-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
M053.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77033 for 1304 contacts (-59.1/contact) +
2D Compatibility (PS) -20989 + (NN) -7753 + (LL) 3280
1D Compatibility (HY) -25600 + (ID) 9650
Total energy: -137745.0 ( -105.63 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_M053.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M053-query.scw
PDB file :
Tito_Scwrl_M053.pdb
: