Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH
M053 Chain:A ((1-275))
SSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGH
General information:
TITO was launched using:
RESULT:
Template:
M053.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56343 for 1713 contacts (-32.9/contact) +
2D Compatibility (PS) -23050 + (NN) -24710 + (LL) 0
1D Compatibility (HY) -22000 + (ID) 10250
Total energy: -136353.0 ( -79.60 by residue)
QMean score : 0.585
(partial model without unconserved sides chains):
PDB file :
Tito_M053.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M053-query.scw
PDB file :
Tito_Scwrl_M053.pdb
: