Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
M053 Chain:A ((23-422)) | ----------------------QLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQ---------IHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITS--------------------------------NKCQKLVREAVKNLEGPPSRN---------------------------------SKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPT-----------ERSMKAILSFAKSHRFDVEFVDEGST--------KKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
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General information:
TITO was launched using:
| RESULT:
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Template: M053.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8162 for 2324 contacts (-3.5/contact) +
2D Compatibility (PS) -33618 + (NN) -21148 + (LL) 9744
1D Compatibility (HY) -38400 + (ID) 15200
Total energy: -106784.0 ( -45.95 by residue)
QMean score : 0.322
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