Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPLEQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPE-A-GWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
2HNL Chain:A ((26-224))
--EKYTLTYFNGRGRAEVIRLLFALANVSYEDNRITRDEWKYLKPR---TPFGHVPMLNVSGNVLGESHAIELLLGGRFGLL-GTNDWEEAKIMAVVLNI-DELFQKLIPWTHEKNTTKKAE--LFRNLSESDVMPFLGRYEKFLKESTTGHIVGNKVSVADLTVFNMLMTLDDEV-----K--LEEYPQLASFVNKIGQMPGIKEWIKKRPKTY---------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HNL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121459 for 1485 contacts (-81.8/contact) +
2D Compatibility (PS) -21561 + (NN) -10328 + (LL) 3296
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -160902.0 ( -108.35 by residue)
QMean score : 0.409
(partial model without unconserved sides chains):
PDB file :
Tito_2HNL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HNL-query.scw
PDB file :
Tito_Scwrl_2HNL.pdb
: