Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAET----LMEPVVSMVRYYEQFGEMPKCIVVGVYE-PKQEDVTV--------VEEVGRPINESARFFEFVSAELVPYIQGKYPIADLKG-VIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMGE----EFSHAL-------------AAGVPNRLFYYMATADVENKVVYDK--AIQFERAMRSAPVHESVEYHFVDFKGSSVNAAKLQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN |
| 3FCX Chain:A ((15-262)) | -------------------LQKVFEHDSVELNCKMKFAVYLPPKAET-GKCPALYWLSGLTCTEQNFISKSGYHQSASEH----GLVVIAPDTSPRGCNI--FGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGA-LICALKNPGKYKSVSAFAPICNPVLCPWGKKAFSGYLGSKWKAYDATHLVKSYP---LDILIDQGKDDQFLLDGQLLPDNFIAACTEKK----IPVVFRLQEDYDHSY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -122120 for 1510 contacts (-80.9/contact) +
2D Compatibility (PS) -21867 + (NN) -10669 + (LL) 15024
1D Compatibility (HY) -7600 + (ID) 1600
Total energy: -148832.0 ( -98.56 by residue)
QMean score : 0.197
|
|
|