Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAVSSNGGAIKAVIYDCDGVMFD-SFEANLAFYQRIMEMMGRPRLSRDNEEQMRILHTYANREVLAHFFP----------------SPGDWEEAVRCAGAIDYRELVPLMIMEEGFREALDTLKG-RVGLGVCTNRSTS-MDMVLRLFSLDSYF-SIVMTASRVTNPKPHPEPLLKVLEHFGIGP-REALFVGDSEVDRLSAEAAGVPFVAYKAPL--------------------------------PAAYRMEHHREIIDLLG |
1SWV Chain:A ((5-256)) | --------KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAI-T---AEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144437 for 1702 contacts (-84.9/contact) +
2D Compatibility (PS) -21530 + (NN) -11619 + (LL) 12
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -188124.0 ( -110.53 by residue)
QMean score : 0.451
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