Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKRVIFLLTGLFIWTSVLLAQNVPEGVIGAFKEGNSQELNKYLGDKVDLIIQNKSTHADKRTAEGTMAAFFSNHKVGSFNVNHQGKRDESGFVIGILMT----------ANGN---FRVNCFFRKVQNKYVIHQIRIDKTDE
2GEY Chain:A ((7-119))
---------------------KALCLEMVAAWNRWDLSGIIKHWSPDIVHYSED--NEVSSADMVKLMEGGLKAFPDLQLEVKSIMAEEDRVALRITVTATHQGEFMGVQPTGQRVSWHLVEELRFVDG--KVVEHWD-----
General information:
TITO was launched using:
RESULT:
Template:
2GEY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37942 for 622 contacts (-61.0/contact) +
2D Compatibility (PS) -10584 + (NN) 513 + (LL) 2836
1D Compatibility (HY) -2000 + (ID) 350
Total energy: -47527.0 ( -76.41 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_2GEY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GEY-query.scw
PDB file :
Tito_Scwrl_2GEY.pdb
: