Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEID--CLAFQPDVLSILIGVNDYWHTLTHGY---------------------------KGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGA-----AI---E-DSKWYPMFDEFRKSARKLSEEFNTIFVPFQSGFD--AAVKLAPARY---WSNDGVHPDLPGRQLMANMWMEATGLK |
| 3BZW Chain:A ((25-260)) | --------------------------------------------QGKKVGYIGDSITDPNCYGD---------NIKKYWDFLKEWLG-------ITPFVYGISGRQWDDVPRQAEKLKKEHGGEVDAILVFMGTNDYNSSVPIGEWFTEQEEQVLSAHGEMKKMVTRKKRTPVMTQDTYRGRINIGITQLKKLFPDKQIVLLTPLHRSLANFGDKNVQPDESYQNGCGEYIDAYVQAIKEAGNIWGIPVIDFNAVTGMNPMVEEQ-LIYFYDAGYDRLHPDTKGQERMARTLMYQLL-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80390 for 1569 contacts (-51.2/contact) +
2D Compatibility (PS) -20904 + (NN) -8788 + (LL) 4448
1D Compatibility (HY) -3200 + (ID) 2100
Total energy: -110934.0 ( -70.70 by residue)
QMean score : 0.276
|
|
|