Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYKKLLDELKKEIGPI---AKIFLNKAME---SLGYDDVDDSNYKE-ILSVLKMN--------KELREYVEIVEERLEKEG
2GA0 Chain:A ((87-154))
--------DDLKGKITTVKNASTSFLTKAKSKTADLGKDDVKDADAKTAID---IADTGAKDKGAEELIKLNTAIDALL----
General information:
TITO was launched using:
RESULT:
Template:
2GA0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3105 for 252 contacts (-12.3/contact) +
2D Compatibility (PS) -5767 + (NN) -3383 + (LL) 1476
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -13329.0 ( -52.89 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_2GA0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GA0-query.scw
PDB file :
Tito_Scwrl_2GA0.pdb
: