Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLAARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRTDYDEIKAEHQDNLLDIVQRAGVEVTWLEN-----------DSGCKGVCGKVPNTDVTSLNL---PEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 4MY4 Chain:A ((316-501)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNTIGEIAQNNNLTQLRIAETEKYPHVTYFMSGG---RNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGD-LDLIILNFANPD----------MVGH------SG---------MLEPTIKAIEAVDECLGEVVDKILDMD---GYAIITADHGNSD--QVLTDDDQPM--TTHTTNPVPVIVTKEGV-----T----------LRETGRLGDLAPTLLDLLNVEQ------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60047 for 1187 contacts (-50.6/contact) +
2D Compatibility (PS) -18834 + (NN) -8292 + (LL) 29056
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -64217.0 ( -54.10 by residue)
QMean score : 0.113
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