Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | TMEELLTSLQKKCGTECEEAHRQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALYPVQQTIHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEELNKCQKLVREAVKNLEGPPSRNVIESATVCHLRPARLPLNCCVFCKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWAISETERSMKAILSFAKSHRFDVEFVDEGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
M054 Chain:A ((23-422)) | ----------------------QLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLIARHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQ---------IHELQRKIHSNSPWWLNVIHRAIEFTIDEELVQRVRNEITS--------------------------------NKCQKLVREAVKNLEGPPSRN---------------------------------SKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPT-----------ERSMKAILSFAKSHRFDVEFVDEGST--------KKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPNPPVLHIIEPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEK |
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General information:
TITO was launched using:
| RESULT:
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Template: M054.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19410 for 2376 contacts (-8.2/contact) +
2D Compatibility (PS) -33168 + (NN) -17974 + (LL) 9744
1D Compatibility (HY) -38400 + (ID) 15200
Total energy: -114408.0 ( -48.15 by residue)
QMean score : 0.312
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