Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAE------TLMEPVVSMVRYYEQFGEMPKCIVVGVYEPKQEDVTVVEEVG--RPINESARFFEFVSAELVPYIQGKYPIADLK-GVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMGE--E-FS------------HA-----------------LAAGVPNRLFYYMATADVE--------------NKVVYDKAIQFERAMRSAPVHESVE-YHFVDFKGSSVNAAK-LQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN |
| 1SFR Chain:A ((7-282)) | -------------------PVEYLQVPSPSMGRDIKVQFQS-----GGANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSG----LSVVMPVGGQSSFYSDWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSA-LTLAIYHPQQFVYAGAMSGLLDPSQAMGPTLIGLAMGDAGGYKASDMWGPKEDPAWQRNDPLLNVGKLIANNTRVWVYCGNGKPSDLGGNNLPAKFLEGFVRTSNIKFQDAYNAGG----GHNGVFDFPDSGTHSWEYWGAQLNAMKPDLQRAL------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174244 for 1826 contacts (-95.4/contact) +
2D Compatibility (PS) -23417 + (NN) -10931 + (LL) 13548
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -199944.0 ( -109.50 by residue)
QMean score : 0.222
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