Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLLLITLLIGYIYPCVAQDKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVDDGSQFVTLYNKENKLTYEKIVYKDTGKTYIGSWSSNVIEYDRFMSQQADFIVDQAFTKAMADEIGKTELMITMLLSPNTGEVMEVNFNFFTFEPYAKVPLHVYREIEVKLKEQIHFKPIEEGKQLNYIMLAWMQKPQGKLPPLPPPGSLM |
| M055 Chain:A ((21-54)) | --------------------DKPIRTEESLEGTVIYKKTTTFEVDGYTYQCDVD------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: M055.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 659 for 127 contacts (5.2/contact) +
2D Compatibility (PS) -3384 + (NN) -278 + (LL) 12920
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: 3817.0 ( 30.06 by residue)
QMean score : 0.047
|
|
|