Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTNITGESQSRGNSGIFLQGMYEVQVLDCYNNPTYVNGQTGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| M055 Chain:A ((63-406)) | --------------------------------------------------------------FTAPSDAIVLFDGKDLSAWESVKGGAAEWDVHDGVFTVNKKKGDIQTKQKFNDFQMHIEWQVPTN-------RGNSGIFLQGMYEVQVLDCYNNPTYVNGQTGSIYKQSIPLANAMRKPGEWNVYDIIYTA-----------HPTVTVIQNGVVLQNHTTILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
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General information:
TITO was launched using:
| RESULT:
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Template: M055.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74199 for 1504 contacts (-49.3/contact) +
2D Compatibility (PS) -19923 + (NN) -7876 + (LL) 4020
1D Compatibility (HY) -25600 + (ID) 9250
Total energy: -132828.0 ( -88.32 by residue)
QMean score : 0.318
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