Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTSVWGKSILALVFTFMCSLAISAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
M055 Chain:A ((24-147))
-----------------------SAASPKDYLYDTKEENGKIISKVVFLQENGLLNKQVRYEFQYNENGKVSEKKAFRWDRTNDEWVPFYQITYQYDDQSGEIKTNYGMWDKKKKNFSLNVQNMIIPSTNYEEIFS
General information:
TITO was launched using:
RESULT:
Template:
M055.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9403 for 626 contacts (15.0/contact) +
2D Compatibility (PS) -11937 + (NN) -2073 + (LL) 2476
1D Compatibility (HY) -15200 + (ID) 5650
Total energy: -22981.0 ( -36.71 by residue)
QMean score : 0.243
(partial model without unconserved sides chains):
PDB file :
Tito_M055.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M055-query.scw
PDB file :
Tito_Scwrl_M055.pdb
: