Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEPIILRYFPVLGRAQALRHALADAELAFRDLRIPL--------EQWSQHKDSDAGGPYGSLPTLRWHGVEVAETIAIASFLARSLGHYEGRDNGEIARLEAVVSLCYTEVSLQIAQLLWLDLFNPGVDLAAAVPLQFGRLVARLTRLEAHTPEAGWFGGERPVMADYFAAEAIEALRYLLGREHDDALRTRLPHLCALARRMAQRPALAQAWSTRPQTFTAHPDEAAMLERLRALPLAATIGASME
3GTU Chain:B ((3-207))
-ESSMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEAPDYDRSQWLDVKFK-LDLDFPNLPYLLDGKNKITQSNAILRYIARKHNMC-GETEEEKIRVDIIENQV-MDFRTQLIRLCYSSDH---EK---LKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIF-D----PKCLDEFPNLKAFMCRFEALEKIAAYLQSDQFC----------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GTU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123062 for 1437 contacts (-85.6/contact) +
2D Compatibility (PS) -21972 + (NN) -16813 + (LL) 3316
1D Compatibility (HY) -10400 + (ID) 1850
Total energy: -170781.0 ( -118.85 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_3GTU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GTU-query.scw
PDB file :
Tito_Scwrl_3GTU.pdb
: