Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQGDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQLRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLKYTKEKLPNTQIVLCEPFTLRDGAAIE---DSKWYPMFDEFRKSARKLSEE-FNTIFVPFQSGFDAAVKLAPARYWSNDGVHPDLPGRQLMANMWMEATGLK |
2HSJ Chain:A ((32-213)) | -------------------------------------------VVEPNILFIGDSIVEYYP--------------------LQE-----LFGTSKTIVNRGIRGYQTGLLLENLDAHLYGGAVDKIFLLIGTNDIGK------DVPVNEALNNLEAIIQSVARDYPLTEIKLLSILPVNEREEYQQAVYIRSNEKIQNWNQAYQELASAYMQVEFVPVFDCLTDQAG-QLKKEYTTDGLHLSIAGYQALSKSLKDYL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49748 for 1421 contacts (-35.0/contact) +
2D Compatibility (PS) -19433 + (NN) -9433 + (LL) 4892
1D Compatibility (HY) -7600 + (ID) 1900
Total energy: -83222.0 ( -58.57 by residue)
QMean score : 0.267
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