Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSFQIDGDAPELLKGAGEAFASVERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDIDPGLLANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMARFSAQEREKAARRP
M056 Chain:A ((1-360))
MRYRPFGSTGVAVSALTLRLADNPRLRANDWRALVFTALENGVNSFQIDGDAPELLKGAGEAFASVERHLLFLTWRLRGDAKQLGPHTLDALKRSAFEGLSLDYLDLLLINDPQSASLPMAFESGLQDLQKGRALRGLGVASRGDIDPGLLANDLVTAVSSPYNLSSGWAERHRIRQASQNNFAVIGEDFWPQALREVADKAPPKPSFWQRRTDPLADVGGYEFLTNTPGWSAEDICLGYALTEPSLATVRVTADNRQEIERLAAVVERDLPTGVCAQIEMA--------------
General information:
TITO was launched using:
RESULT:
Template:
M056.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128584 for 2426 contacts (-53.0/contact) +
2D Compatibility (PS) -29779 + (NN) -12483 + (LL) 1188
1D Compatibility (HY) -35600 + (ID) 14100
Total energy: -219358.0 ( -90.42 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_M056.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M056-query.scw
PDB file :
Tito_Scwrl_M056.pdb
: