Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLA---ARGDEIVNFPQVR-S-CGTSTAHSLPCMFSTFD-RT-------DYD---E-------------------------IKAEHQDNLLDIVQRAGVE-----------------------VTWLENDSGCKGVC----GKVPN----T-----DVT-----SLNLPEYCR-----------------------------NGECLDNILLTKFDEVLNKN-----DKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 3Q3Q Chain:A ((37-358)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATPPKLIVAISVDQFSADLFSEYRQY--YTGGLKRLTSEG---AVFPRGYQSHAATETCPGHSTILTGSRPSRTGIIANNWFDLDAKREDKNLYCAEDESQPGSSSDKYEASPLHLKVPTLGGRMKAANPATRVVSVAGKDRAAIMMGGATADQVWWLGGPQ---GYVSYKGVAPTPLVTQVNQAFAQRLAQPNPGFELPAQCVSKDFPVQAGNRTVGTGRFARDAGDYKGFRISPEQDAMTLAFAAAAIENMQLGKQAQTDIISIGLSATDYVGH--T-------FGT--E-------G-----TESCIQVDRLDTELGAFFDKLDKDGI-DYVVVLTADHGGHDLPERHRMN------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62879 for 1382 contacts (-45.5/contact) +
2D Compatibility (PS) -21941 + (NN) -6277 + (LL) 28280
1D Compatibility (HY) -800 + (ID) 1600
Total energy: -65217.0 ( -47.19 by residue)
QMean score : 0.104
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