Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYLTIVIALVTLQSAFSQVISETFSSGRLNRKQKIGIYKPEKYTDRQAYPLIVVLNAE------TLMEPVVSMVRYYEQFGEMPKCIVVGVYEPKQEDVTVVEEVGRPIN--ESARFFEFVSAELVPYIQGKYPIADLK-GVIASEEAGFLANYYMLAEKKPTFNMIVSLNPVALPRMGE---EFSH------------A-----------------LAAGVPNRLFYYMATADVE--------------NKVVYDKAIQFERAMRSAPVHESVE-YHFVDFKGSSVNAAK-LQGIAQALDMCFDIYKPIGGKEFKTQMETLETGIYEYLENKYNTIYKQLGVKKVPILNDVMATYTAINSSQDWESLKKLAKYVESNGYLKTAMPNFFLAEYYEKIGDDKKALKTYQKAYTEPNIDFITGDLINERITHLQATKRKSKHTKVIEPIEPTEEVAPAQEEQNPTDESNQN |
| 4MQL Chain:A ((10-281)) | --------------------VEYLQVPSASMGRDIKVQFQG-------GGPHAVYLLDGLRAQDDYNGWDINTPAFEEYYQSG----LSVIMPVGGQSSFYTDWYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSA-LILAAYYPQQFPYAASLSGFLNPSEGWWPTLIGLAMNDSGGYNANSMWGPSSDPAWKRNDPMVQIPRLVANNTRIWVYSGNGTPSDLGGDNIPAKFLEGLTLRTNQTFRDTYAAD----GGRNGVFNFPPNGTHSWPYWNEQLVAMKADIQHV------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MQL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173369 for 1749 contacts (-99.1/contact) +
2D Compatibility (PS) -22682 + (NN) -8676 + (LL) 13672
1D Compatibility (HY) -2400 + (ID) 1250
Total energy: -194705.0 ( -111.32 by residue)
QMean score : 0.232
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