Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITYKKLLDELKKEIGPIAKIFLNKAMESLGYDDVDDSNYKEILSVLKMNKELREYVEIVEERLEKEG
1S0P Chain:A ((163-206))
------------AEMRGSAEFYTNRILKE--FKGVNQDQVDWVSNYVNFLKDLEKYIK----------
General information:
TITO was launched using:
RESULT:
Template:
1S0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2367 for 228 contacts (-10.4/contact) +
2D Compatibility (PS) -4748 + (NN) -3101 + (LL) 2288
1D Compatibility (HY) -4400 + (ID) 350
Total energy: -12678.0 ( -55.61 by residue)
QMean score : 0.298
(partial model without unconserved sides chains):
PDB file :
Tito_1S0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S0P-query.scw
PDB file :
Tito_Scwrl_1S0P.pdb
: