Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTRSLDHAKAEAELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGTFEYEEYISLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL
M058 Chain:A ((14-307))
-------------AELAINIKKATSPEETAPKRKHVRSCIVYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPVTLREAMANRGWIDSLSRGMMGEGVRGYGPLIREYVHFLLAKLSFHKQHPEFNGT-------SLKAIHDPNEGYETITDLMTLQDKIDQFQKLIFSHFRHIGNNECRISALVPLVAESYGIYKFITSMLRAMHSSTGDNEALEPLRQRYDAQHYRLVKFYYECSNLRYLTSLITIPKL
General information:
TITO was launched using:
RESULT:
Template:
M058.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107138 for 1998 contacts (-53.6/contact) +
2D Compatibility (PS) -26079 + (NN) -14847 + (LL) 1960
1D Compatibility (HY) -35200 + (ID) 12100
Total energy: -193404.0 ( -96.80 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_M058.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M058-query.scw
PDB file :
Tito_Scwrl_M058.pdb
: