Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVGVSTSAPLSPTSGTSVGMSTFSIMDYVVFVLLLVLSLAIGLYHACRGWGRHTVGELLMADRKMGCLPVALSLLATFQSAVAILGVPSEIYRFGTQYWFLGCCYFLGLLIPAHIFIPV---FYRLHLTSAYEYLELRFNKTVRVCGTVTFIFQMVIYMGVVLYAPSLALNAVTGF-----DLWLSVLALGIVCTVYTALGGLKAVIWTDVFQTLVMFLGQLAVIIVGSAKVG-GLGRVWAVASQHGRISGFELDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLS--------SRTEKAAVLSCYAVFPFQQVSLCVGCLIGLVMFAYYQEYPMSIQQAQAAPDQFVLYFVMDLLKGLPGLPGLFIACLFSGSLSTI-SSAFNSLATVTMEDLIRPWFPEFSEARAIMLSRGLAFGYGLLCLGMAYISSQMGPVLQAAISIFGMVGGPLLGLFCLGMFFPCAN---------P-------PG----AVVGLLAGLVMAFWIGIGSIVTSMGSSMPPSPSNGSSFSLPTNLTVATVTTLMPLTTFSKPTGLQRFYSLSYLWYSAHNSTTVIVVGLIVSLLTGRMRGRSLNPATIYPVLPKLLSLLPLSCQKRLHCRSYGQDHLDTGLFPEKPRNGVLGDSRDKEAMALDGTAYQGSSSTCILQETSL |
| 2JLN Chain:A ((22-424)) | ------------------------------------------------------------YAERSVGPFSLAAIWFAMAIQVAIFIAAGQ--MTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRWG-INFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNLPLWIVIFGAIQVVTT-FYGITFIRWMNVFASPVLLAMGVYMVYLMLDGADVSLGEVMSMGGE-----------NP--GMPFS-TAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARYATA-QWLGMVPASIIFGFIGAASMVLVGE---------WNPVIAITEVVGG-VS--IPMAILFQVFVLLATWSTNPAANLLSPAYTLCS-TFPRVF---------TFKTG-VIVSAVVGLLMMPW--QFAGVLNTFLNLLASALGPLAGIMISDYFLVRRRRISLHDLYRTKGIYTYWRGVNWVALAVYAVALAVSFLTPDLMFVTGLIAALLLHIPAMRWVAKTFPLFSEAESRNEDYLRPIGP----------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2JLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -396851 for 2956 contacts (-134.3/contact) +
2D Compatibility (PS) -36172 + (NN) -3436 + (LL) 13664
1D Compatibility (HY) -20800 + (ID) 3100
Total energy: -446695.0 ( -151.11 by residue)
QMean score : 0.237
|
|
|