Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKPNLRPKLGSSALIAFLSLYSSLVLNYAFFAKVVELHPFNGTGADIFLYTMPVVLFFLSNFVFHVIALPFVHKVLIPLILVISAAVSYQEIFFNIYFNKSMLNNVLQTTAAESARLITPGYVLWIVCLGVLPALAYIAVKVKYRVWYKELLTRLVLAAVSFLCALGIAMLQYQDYASFFRNNKSVTHLIVPSNFIGAGVSKYKDWKRSNIPYTQLDMAVVQNRPAGSLRRFVVLVVGETTRAANWGLNGYSRQTTPLLA---ARGDEIVNFPQVRSCGTSTAHSLPCMFSTFDRT--------DYDEIK----------AEHQDNLLDIVQRAGVEVTWLEN--------DSGCK-----GVCGKVPNTD--------V----TSLNLPEYCRNGECLDNILLTKFDEVLNKNDKDAVLILHTIGSHGPTYYERYTEAERKFTPTCDTNEINKCTRATLVNTYDNTVLYVDQFIDKVIRKLENRDDLESVVHYVSDHGESLGENGMYLHAAPYAIAPSGQTHIPMVMWFSKAFRQHGGIDFQCLKQKAAENEYSHDHYFSTVLGLMDISNSQTYRKEMDILAACRRPR |
| 3SZY Chain:A ((22-258)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRVPA-IAVCLDGCEPAYLDAAI-DAGLMPALKRIKERG---AVRLAHSVIPSFTNPNNLSIATGSPPAVHGICGNYLYEPSTGEEVMMNDPKFLRAPTIFQAFYDAGARVAVVTAKDKLRALLGKGLRFDEGRAVCFSSEKSDKATRAEHGIDNASAWLGRPVPEVYSAALSEFVFAAGVKLLREFRPDI-MYLTT----TDYVQHKYA-------P--GV------------PEANSFYEMFDRYLAELDG-----L--GAAIVVTADHGMKP--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32101 for 1476 contacts (-21.7/contact) +
2D Compatibility (PS) -20816 + (NN) -9706 + (LL) 28796
1D Compatibility (HY) -4000 + (ID) 1400
Total energy: -39227.0 ( -26.58 by residue)
QMean score : 0.114
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