Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTEETFLLNNSRFYITIQSLDSDGMTKSDLKSVLKDYANDDGVKDQSAVQEFELPQFFGTYLKGSCETDHCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE
M059 Chain:A ((1-222))
MKKVLLLVFLSLTWLSASAQALVPITWTAYGLTFEAPKGILVEEDTEETFLLNNSRFYITIQSLDSDGMTKSDLKSVLKDYANDDGVKDQSAVQEFELPQFFGTYLKGSCETDHCLYACLMTKAAGSGFYISIIYSKENENIAEKILKSFTMEE
General information:
TITO was launched using:
RESULT:
Template:
M059.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116202 for 1373 contacts (-84.6/contact) +
2D Compatibility (PS) -15621 + (NN) 1236 + (LL) 0
1D Compatibility (HY) -24000 + (ID) 7700
Total energy: -162287.0 ( -118.20 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_M059.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M059-query.scw
PDB file :
Tito_Scwrl_M059.pdb
: