Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MAVKVQTTKRGDPHELRNIFLQYASTEVDGERYMTPEDFVQRYLGLYNDPNSNPKIVQLLAGVADQTKDGLISYQEFLAFESVLCAPDSMFIVAFQLFDKSGNGEVTFENVKEIFGQTIIHHHIPFNWDCEFIRLHFGHNRKKHLNYTEFTQFLQELQ-------LEHARQAFALKDKSKSGMISGLDFSDIMVTIRSHMLTPFVEENLVSAAGGSISHQVSFSYFNAFNSLLNNMELVRKIYSTLAGTRKDVEVTKE-------EFAQSAIRYGQVTPLEIDILYQLADLYNASGRL-TLADIERIAPLAEGALPYNLAELQRQQSPGLGRPIWLQIAESAYRFTLGSVAGAVGATAVYPIDLVKTRMQNQRGSGSVVGELMYKNSFDCFKKVLRYEGFFGLYRGLIP-----------QLIGVAPEK----AIKLTVNDFVRDKFTRRDGSVPLPAEVLAGGCAGGSQVIFTNPLEIVKIRLQVAGEITTGPRVSALNVLRDLGI-FGLYKGAKACFLR--------DIPFSAIYFPVYA----HCKLLLADENGHVGGLNLLAAGAMAGVPAASLVTPADVIKTRLQVAA-----RAGQTTYSGVIDCFRKI-LREEGPSAFWKGTAARVFRSSPQFGVTLVTYELLQRWFYIDFGGLKPAGSEPTPKSRIADLPPANPDHIGGYRLATATFAGIENKFGLYLPKFKSPSVAVVQPKAAVAATQ |
| 4M59 Chain:A ((6-714)) | PDAQVLVLAISSHPLPTLAAFLASRRDELLRADITSLLKALELSGHWEWALALLRWAGKEGAADASALEMVVRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYG-------RMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACSRDGLVDEAVAFFEDLKA--RGHAPSVVTYNALLQVFGKAGNYTEALRVLGEMEQ--NGCQPDAVTYNELAGTEEAARCLDTMASPNAFTYNTVMTAYGNVGK--VDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCT-----PNRVTWNTMLAVSGKRG-----MEDYVTRVLEGMRSSGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKG---------GNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGGYSSLEMF------------SEAREVIGYMVQHGLKPMELTYRRVVESYCRAFEEARGFLSE---------VKALEAYIEDA |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4M59.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149797 for 4841 contacts (-30.9/contact) +
2D Compatibility (PS) -64987 + (NN) -4183 + (LL) 3896
1D Compatibility (HY) -10800 + (ID) 4550
Total energy: -230421.0 ( -47.60 by residue)
QMean score : 0.250
|
|
|