Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEHSEGAPGDPAGTVVPQELLEEMLWFFRVEDASPWNHSILALAAVVVIISMVLLGRSIQASRKEKMQPPEKETPEVLHLDEAKDHNSLNNLRETLLSEKPNLAQVELELKERDVLSVFLPDVPETES
2ZXE Chain:G ((21-40))
-------------------------------------VVGLIVAAVLCVIGIIILLAGK---------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4332 for 70 contacts (-61.9/contact) +
2D Compatibility (PS) -2219 + (NN) -2553 + (LL) 6804
1D Compatibility (HY) -4000 + (ID) 300
Total energy: -6600.0 ( -94.29 by residue)
QMean score : -0.152
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXE-query.scw
PDB file :
Tito_Scwrl_2ZXE.pdb
: