Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASESSPLLAYRLLGEEGVALPANGAGGPGGASARKLSTFLGVVVPTVLSMFSIVVFLRIGFVVGHAGLLQALAMLLVAYFILALTVLSVCAIATNGAVQGGGAYFMISRTLGPEVGGSIGLMFYLANVCGCAVSLLGLVESVLDVFGADATGPSGLRVLPQGYGWNLLYGSLLLGLVGGVCTLGAGLYARASFLTFLLVSGSLASVLISFVAVGPRDIRLTPRPGPNGSSLPPRFGHFTGFNSSTLKDNLGAGYAEDYTTGAVMNFASVFAVLFNGCTGIMAGANMSGELKDPSRAIPLGTIVAVAYTFFVYVLLFFLSSFTCDRTLLQEDYGFFRAISLWPPLVLIGIYATALSASMSSLIGASRILHALARDDLFGVILAPAKVVSRGGNPWAAVLYSWGLVQLVLLAGKLNTLAAVVTVFYLVAYAAVDLSCLSLEWASAPNFRPTFSLFSWHTCLLGVASCLLMMFLISPGAAGGSLLLMGLLAALLTARGGPSSWGYVSQALLFHQVRKYLLRLDVRKDHVKFWRPQLLLLVGNPRGALPLLRLANQLKKG-GLYVLGHVTLGDLDSLPSDPVQPQYGAWLSLVDRAQVKAFVDLTLSPSVRQGAQHLLRISGLGGMKPNTLVLGFYDDAPPQDHFLTDPAFSEPADSTREGSSPALSTLFPPPRAPGSPRALNPQDYVATVADALKMNKNVVLARASGALPPERLSRGSGGTSQLHHVDVWPLNLLRPRGGP-G-YVDVCGLFLLQMATILGMVPAWHSARLRIFLCLGPREAPGAAEGRLRALLSQLRIRAEVQEVVWGEGAGAGEPEAEEEGDFVNSGRGDAEAEALARSANALVRAQQGRGTGGGPGGPEGGDAEGPITALTFLYLPRPPADPARYPRYLALLETLT-RDLGPTLLVHGVTPVTCTDL |
| 3G40 Chain:A ((492-759)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WKANLLVPVEDPRELMGTFDFLRDITYPKGSVKLLGLA----DK-E--NLLSQLPSISEGFQEEGVFSSWTII-----EENLVVGMEALTGSFFRPSILFLRLPENRDR------------------------------------------DEEIREIIRKASMYRMGVLLFSKHPQA----------GLGRQNLINLWIEN--R---WDISMELGNM-DLALLIAYKLKSNW---KASLSFMTFAPTAIQAQAAENFLQSLAELARIPNVKM-QVLRE--------------------------------------------------NPIKSSKLPFASLHIFSLDPNPD-LD----L---ARHLMEKAGSSCIFALDSGEENALAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G40.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191053 for 2071 contacts (-92.3/contact) +
2D Compatibility (PS) -28412 + (NN) -20503 + (LL) 39052
1D Compatibility (HY) -9200 + (ID) 2050
Total energy: -212166.0 ( -102.45 by residue)
QMean score : 0.477
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