Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK-------------------------------------------------------------------------------------------------- |
| 1LM5 Chain:A ((2616-2811)) | ------SSPIAAIFDTENLEKISITEGIERGIVDSITGQRLLEAQA------------CTGGIIHPTTGQKLSLQDAVSQGVIDQDMATRLKPAQKAFIGFKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQDTSSYAKILTCPKTKLKISYKDAINRSMVEDITGLRLLEAASVSSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3115 for 675 contacts (-4.6/contact) +
2D Compatibility (PS) -9450 + (NN) -658 + (LL) 368
1D Compatibility (HY) -800 + (ID) 600
Total energy: -14255.0 ( -21.12 by residue)
QMean score : 0.181
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