Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKRLLTVAAFALAGCVTVVAQDKKKEFKMPTGYAGITHEMSEFYEPVPPVVTPGTDLKGGGFTAPSDAIVLFDGKDLSAWESVKGGA---AEWDVHDGVFTVNK-------KKGDIQTKQKFNDFQMHIEWQV-------------PTNITGESQSRGNSGIFLQGMYEVQVLDCYNNPTYVNGQTGSIYKQSIPLANAMRKPGEWNVYDIIYTAPTFKEDGSYRTHPTVTVIQ--------NGVVLQNHT-------TILGTTEWIGFPQVKKHGAGPIILQSHGDPSEPISFRNIWIREL |
| 4JQT Chain:A ((225-430)) | ----------------------------------------------------------------------LLWDGKTNNGWRGAKLNAFPEKGWKMEDGILKVMKSGGAESANGGDIVTTRKYKNFILTVDFKITEGANSGVKYFVNPDLNKGEGSAIG---------CEFQILDDDKHPDAKLGVKGN------------RKLG--SLYDLI-PAPEKKPFNKKDFNTATIIVQDNHVEHWLNGVKLIEYTRNTDMWNALVAYSKYKNWPNFGNSAEGNILLQDHGD---EVWFKNVKIKEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24575 for 1155 contacts (-21.3/contact) +
2D Compatibility (PS) -17927 + (NN) -2995 + (LL) 5804
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -53743.0 ( -46.53 by residue)
QMean score : 0.236
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