Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHHHHHHSHMQQAISEKDRGNGFFKEGKYERAIECYTRGI--AADGANALLPA---NRAMAYLKIQKYEEAEKDCTQAILLDGSYSKAFARRGTARTFLGKLNEAKQDFETVLLLEPGNKQAVTELSKIKK
4I2Z Chain:A ((5-126))
----------VQTAEEIRDEGNAAVKDQDYIKADELYTEALQLTTDEDKALRPVLYRNRAMARLKRDDFEGAQSDCTKALEFDGADVKALFRRSLAREQLGNVGPAFQDAKEALRLSPNDKGIVEVLQRLVK
General information:
TITO was launched using:
RESULT:
Template:
4I2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12950 for 866 contacts (15.0/contact) +
2D Compatibility (PS) -12418 + (NN) -4825 + (LL) 316
1D Compatibility (HY) -3600 + (ID) 2400
Total energy: -9977.0 ( -11.52 by residue)
QMean score : 0.266
(partial model without unconserved sides chains):
PDB file :
Tito_4I2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I2Z-query.scw
PDB file :
Tito_Scwrl_4I2Z.pdb
: